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The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). The Marine Predators Algorithm (MPA)is a recently developed meta-heuristic algorithm that emulates the relation among the prey and predator in nature37. Types of coronavirus, their symptoms, and treatment - Medical News Today Deep learning plays an important role in COVID-19 images diagnosis. The lowest accuracy was obtained by HGSO in both measures. Softw. Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. Zhu, H., He, H., Xu, J., Fang, Q. Wu, Y.-H. etal. After applying this technique, the feature vector is minimized from 2000 to 459 and from 2000 to 462 for Dataset1 and Dataset 2, respectively. Havaei, M. et al. In addition, up to our knowledge, MPA has not applied to any real applications yet. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Brain tumor segmentation with deep neural networks. For example, as our input image has the shape \(224 \times 224 \times 3\), Nasnet26 produces 487 K features, Resnet25 and Xception29 produce about 100 K features and Mobilenet27 produces 50 K features, while FO-MPA produces 130 and 86 features for both dataset1 and dataset 2, respectively. Donahue, J. et al. Finally, the predator follows the levy flight distribution to exploit its prey location. arXiv preprint arXiv:2004.07054 (2020). SMA is on the second place, While HGSO, SCA, and HHO came in the third to fifth place, respectively. 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. \(\Gamma (t)\) indicates gamma function. One of these datasets has both clinical and image data. The parameters of each algorithm are set according to the default values. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. and A.A.E. Key Definitions. The combination of Conv. In this paper, different Conv. 51, 810820 (2011). Technol. Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. Syst. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Classification of COVID-19 X-ray images with Keras and its - Medium It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. Therefore, in this paper, we propose a hybrid classification approach of COVID-19. Mirjalili, S., Mirjalili, S. M. & Lewis, A. Grey wolf optimizer. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . Stage 3: This stage executed on the last third of the iteration numbers (\(t>\frac{2}{3}t_{max}\)) where based on the following formula: Eddy formation and Fish Aggregating Devices effect: Faramarzi et al.37 considered the external impacts from the environment, such as the eddy formation or Fish Aggregating Devices (FADs) effects to avoid the local optimum solutions. Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. Artif. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. In ancient India, according to Aelian, it was . https://keras.io (2015). Use the Previous and Next buttons to navigate the slides or the slide controller buttons at the end to navigate through each slide. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). You have a passion for computer science and you are driven to make a difference in the research community? 115, 256269 (2011). Imaging Syst. Netw. Image Classification With ResNet50 Convolution Neural Network (CNN) on Covid-19 Radiography | by Emmanuella Anggi | The Startup | Medium 500 Apologies, but something went wrong on our end.. arXiv preprint arXiv:2004.05717 (2020). The memory terms of the prey are updated at the end of each iteration based on first in first out concept. Moreover, a multi-objective genetic algorithm was applied to search for the optimal features subset. [PDF] Detection and Severity Classification of COVID-19 in CT Images org (2015). and JavaScript. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. [PDF] COVID-19 Image Data Collection | Semantic Scholar Methods Med. Fusing clinical and image data for detecting the severity level of Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. The proposed CNN architecture for Task 2 consists of 14 weighted layers, in which there are three convolutional layers and one fully connected layer, as shown in Fig. 79, 18839 (2020). BDCC | Free Full-Text | COVID-19 Classification through Deep Learning Classification of Covid-19 X-Ray Images Using Fuzzy Gabor Filter and \(Fit_i\) denotes a fitness function value. 25, 3340 (2015). While the second dataset, dataset 2 was collected by a team of researchers from Qatar University in Qatar and the University of Dhaka in Bangladesh along with collaborators from Pakistan and Malaysia medical doctors44. \delta U_{i}(t)+ \frac{1}{2! In the meantime, to ensure continued support, we are displaying the site without styles In Eq. Then, using an enhanced version of Marine Predators Algorithm to select only relevant features. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. The family of coronaviruses is considered serious pathogens for people because they infect respiratory, hepatic, gastrointestinal, and neurologic diseases. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. Harikumar, R. & Vinoth Kumar, B. Ge, X.-Y. The updating operation repeated until reaching the stop condition. Get the most important science stories of the day, free in your inbox. ), such as \(5\times 5\), \(3 \times 3\), \(1 \times 1\). In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. Syst. Medical imaging techniques are very important for diagnosing diseases. Scientific Reports Volume 10, Issue 1, Pages - Publisher. Whereas, the worst algorithm was BPSO. J. The experimental results and comparisons with other works are presented inResults and discussion section, while they are discussed in Discussion section Finally, the conclusion is described in Conclusion section. Expert Syst. They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. 69, 4661 (2014). A. et al. Semi-supervised Learning for COVID-19 Image Classification via ResNet Math. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. wrote the intro, related works and prepare results. To obtain Cauchemez, S. et al. Afzali, A., Mofrad, F.B. medRxiv (2020). It also contributes to minimizing resource consumption which consequently, reduces the processing time. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! Sci. A Review of Deep Learning Imaging Diagnostic Methods for COVID-19 volume10, Articlenumber:15364 (2020) Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. & Baby, C.J. Emphysema medical image classification using fuzzy decision tree with fuzzy particle swarm optimization clustering. 2 (left). More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. Although the performance of the MPA and bGWO was slightly similar, the performance of SGA and WOA were the worst in both max and min measures. Robertas Damasevicius. Inf. Health Inf. In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. Deep residual learning for image recognition. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. While55 used different CNN structures. The second one is based on Matlab, where the feature selection part (FO-MPA algorithm) was performed. To address this challenge, this paper proposes a two-path semi- supervised deep learning model, ssResNet, based on Residual Neural Network (ResNet) for COVID-19 image classification, where two paths refer to a supervised path and an unsupervised path, respectively. Biocybern. They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. 101, 646667 (2019). In general, feature selection (FS) methods are widely employed in various applications of medical imaging applications. Frontiers | AI-Based Image Processing for COVID-19 Detection in Chest In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. Hence, the FC memory is applied during updating the prey locating in the second step of the algorithm to enhance the exploitation stage. Access through your institution. (15) can be reformulated to meet the special case of GL definition of Eq. COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. & Cao, J. J. Med. SharifRazavian, A., Azizpour, H., Sullivan, J. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! A features extraction method using the Histogram of Oriented Gradients (HOG) algorithm and the Linear Support Vector Machine (SVM), K-Nearest Neighbor (KNN) Medium and Decision Tree (DT) Coarse Tree classification methods can be used in the diagnosis of Covid-19 disease. "PVT-COV19D: COVID-19 Detection Through Medical Image Classification New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. 40, 2339 (2020). Building a custom CNN model: Identification of COVID-19 - Analytics Vidhya The first one, dataset 1 was collected by Joseph Paul Cohen and Paul Morrison and Lan Dao42, where some COVID-19 images were collected by an Italian Cardiothoracic radiologist. M.A.E. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. One of the main disadvantages of our approach is that its built basically within two different environments. In this subsection, a comparison with relevant works is discussed. After feature extraction, we applied FO-MPA to select the most significant features. One of the best methods of detecting. The . Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. Interobserver and Intraobserver Variability in the CT Assessment of Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. In 2018 IEEE International Symposium on Circuits and Systems (ISCAS), 15 (IEEE, 2018). COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. Adv. Comput. Going deeper with convolutions. Arijit Dey, Soham Chattopadhyay, Ram Sarkar, Dandi Yang, Cristhian Martinez, Jesus Carretero, Jess Alejandro Alzate-Grisales, Alejandro Mora-Rubio, Reinel Tabares-Soto, Lo Dumortier, Florent Gupin, Thomas Grenier, Linda Wang, Zhong Qiu Lin & Alexander Wong, Afnan Al-ali, Omar Elharrouss, Somaya Al-Maaddeed, Robbie Sadre, Baskaran Sundaram, Daniela Ushizima, Zahid Ullah, Muhammad Usman, Jeonghwan Gwak, Scientific Reports For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. Ozturk, T. et al. Refresh the page, check Medium 's site status, or find something interesting. In this work, we have used four transfer learning models, VGG16, InceptionV3, ResNet50, and DenseNet121 for the classification tasks. Some people say that the virus of COVID-19 is. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. Compared to59 which is one of the most recent published works on X-ray COVID-19, a combination between You Only Look Once (YOLO) which is basically a real time object detection system and DarkNet as a classifier was proposed. D.Y. https://doi.org/10.1038/s41598-020-71294-2, DOI: https://doi.org/10.1038/s41598-020-71294-2. The accuracy measure is used in the classification phase. Google Scholar. However, WOA showed the worst performances in these measures; which means that if it is run in the same conditions several times, the same results will be obtained. Can ai help in screening viral and covid-19 pneumonia? A. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). Dhanachandra, N. & Chanu, Y. J. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. The convergence behaviour of FO-MPA was evaluated over 25 independent runs and compared to other algorithms, where the x-axis and the y-axis represent the iterations and the fitness value, respectively. Sci Rep 10, 15364 (2020). Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. A.A.E. 198 (Elsevier, Amsterdam, 1998). is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. We are hiring! Coronavirus disease (Covid-19) is an infectious disease that attacks the respiratory area caused by the severe acute . where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. 2. While the second half of the agents perform the following equations. EMRes-50 model . 10, 10331039 (2020). Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. In Medical Imaging 2020: Computer-Aided Diagnosis, vol. Radiology 295, 2223 (2020). contributed to preparing results and the final figures. Evaluation outcomes showed that GA based FS methods outperformed traditional approaches, such as filter based FS and traditional wrapper methods. Automated detection of covid-19 cases using deep neural networks with x-ray images. 42, 6088 (2017). Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. Diagnosis of parkinsons disease with a hybrid feature selection algorithm based on a discrete artificial bee colony. They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. Inspired by our recent work38, where VGG-19 besides statistically enhanced Salp Swarm Algorithm was applied to select the best features for White Blood Cell Leukaemia classification. https://doi.org/10.1016/j.future.2020.03.055 (2020). Currently, we witness the severe spread of the pandemic of the new Corona virus, COVID-19, which causes dangerous symptoms to humans and animals, its complications may lead to death. They applied the SVM classifier with and without RDFS. Jcs: An explainable covid-19 diagnosis system by joint classification and segmentation. Google Scholar. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. Slider with three articles shown per slide. However, the proposed FO-MPA approach has an advantage in performance compared to other works. (23), the general formulation for the solutions of FO-MPA based on FC memory perspective can be written as follows: After checking the previous formula, it can be detected that the motion of the prey becomes based on some terms from the previous solutions with a length of (m), as depicted in Fig. On January 20, 2023, Japanese Prime Minister Fumio Kishida announced that the country would be downgrading the COVID-19 classification. Arithmetic Optimization Algorithm with Deep Learning-Based Medical X Inf. & Zhu, Y. Kernel feature selection to fuse multi-spectral mri images for brain tumor segmentation. Accordingly, that reflects on efficient usage of memory, and less resource consumption. Article Chollet, F. Keras, a python deep learning library. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. PubMed Google Scholar. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies.

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covid 19 image classification